I have individual-level survival data for a cohort of people with my exposure variable of interest coded 0-3. I would like to calculate SMR for exposure groups 1-3 using exposure = 0 as the reference group. I've therefore saved the age group-specific mortality rates in a separate file, sorted by age group.
I can't share the data itself due to confidentiality restrictions but here is an example of what it looks like (simplifying to 3 age groups):
Code:
clear input byte exposure float(age_group failure persontime id) 0 1 0 15 1 0 1 0 15 2 0 1 0 7 3 0 1 1 3 4 0 1 1 2.5 5 0 2 0 5 6 0 2 0 15 7 0 2 0 15 8 0 2 0 11 9 0 2 1 5 10 0 2 1 4 11 0 2 1 2.2 12 0 3 0 3.2 13 0 3 0 15 14 0 3 0 15 15 0 3 0 7 16 0 3 1 3.2 17 0 3 1 9.4 18 0 3 1 14 19 1 1 0 15 20 1 1 0 15 21 1 1 0 8 22 1 1 1 3 23 1 2 0 9 24 1 2 0 15 25 1 2 0 15 26 1 2 0 4 27 1 2 1 12 28 1 2 1 .5 29 1 3 0 6 30 1 3 0 15 31 1 3 0 15 32 1 3 1 8 33 1 3 1 2 34 1 3 1 4 35 2 1 0 15 36 2 1 0 14 37 2 1 0 8 38 2 1 1 6 39 2 2 0 13 40 2 2 0 15 41 2 2 0 8 42 2 2 0 5 43 2 2 1 1 44 2 2 1 15 45 2 3 0 9 46 2 3 0 15 47 2 3 0 15 48 2 3 1 9 49 2 3 1 6 50 2 3 1 1 51 3 1 0 13 52 3 1 0 10 53 3 1 1 3 54 3 1 1 7 55 3 2 0 15 56 3 2 0 15 57 3 2 0 9 58 3 2 1 6.3 59 3 2 1 7 60 3 2 1 1 61 3 3 0 14 62 3 3 0 15 63 3 3 0 12 64 3 3 0 8 65 3 3 1 11 66 3 3 1 12 67 end
When I try to run stptime with the SMR option, I get the following error message:
"using data not sorted"
Code:
stptime, smr(age_group rate) using("U:\working\unexposed_rates.dta" by(exposure) per(100000)
Code:
stptime if exposure>0, smr(age_group rate) using("U:\working\unexposed_rates.dta" by(exposure) per(100000)
Any suggestions as to where I might be going wrong gratefully received.
Thanks
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